Proteomics

ProDB was developed for the large scale analysis of proteome data. The system handles data conversion from different mass spectrometer software, automates data analysis, and allows the annotation of MS spectra (e.g. assign gene names, store data on protein modifications). The system stores the mass spectra together with numerous details about the experimental setup.

Aldente is a tool to identify proteins from peptide mass fingerprinting data. This new, fast and powerful tool takes advantage of the Hough transform for spectra recalibration and outlier exclusion.

Advanced Proteolytic Fingerprinting at the IGH Cell Biology Server.

The program PARE calculates the change in rate of association (kon) of mutant protein-protein interaction complexes from the change in the Debye Huckel energy of interaction.

This is a web server for analysis and comparison of two-dimensional electrophoresis (2-DE) Gel images. It helps in annotating the virual 2-D gel image proteins on the basis of known molecular weight andpH scales of the markers.