Virus

ShiBASE is an integrated database for comparative genomics of Shigella

VirGen a comprehensive viral genome resource, which organizes the ‘sequence space’ of viral genomes in a structured fashion. It has been developed with an objective to serve as an annotated and curated database for complete viral genome sequences.

The Emiliania huxleyi virus 86 (EhV86) genome page is provided by The Wellcome Trust Sanger Institute, as part of a microbial sequencing effort focusing on pathogens and model organisms. EhV86 is a double stranded DNA virus that infects Emiliania huxleyi, a marine phytoplankton host. In addition to an overview of the project, the complete genome sequence and annotation is available in Artemis format

The SARS coronavirus Tor2 genome page is provided by TIGR. The datbase provides information obtained from the analysis of this genome, including protein/gene lists, analyses such as GC plots and comparisons, 2D-gels, and recent gene duplications. It is possible to perform a PubMed search or genome searches based on name, locus, position, EC#, TIGRFAM or HMM, and to choose links to external sites related to this genome.

Provides access to viral genomes and a variety of tools for comparative genomic analyses.

VIPERdb is a database for icosahedral virus capsid structures.

VIDA-Virus Database at University College London contains a complete collection of homologous protein families derived from open reading frames from complete and partial virus genomes.

The T4-like bacteriophage genome database is a compilation of information resources for T4-like Bacteriophage Genomes.

The Subviral RNA database contains a large number of sequences and related data on viroids, viroid-like RNAs and human hepatitis delta virus (vHDV).

SARS-CoV RNA SSS DATABASE is a database of the predicted RNA secondary structural sequences of six SARS coronavirus complete genomes which were sequenced and submitted to GenBank.